STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI72619.1Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (135 aa)    
Predicted Functional Partners:
SFJ38665.1
PAS domain S-box-containing protein.
  
 0.987
SFI69445.1
GAF domain-containing protein.
  
 0.966
SFJ82233.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.957
SFI61296.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.955
SFJ15130.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
  0.757
SFI72589.1
Glycosyltransferase, MGT family.
       0.689
SFI72552.1
Lysophospholipase L1.
       0.570
SFI62555.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
     0.559
SFI74955.1
Signal transduction histidine kinase.
  
 
 0.549
SFK37986.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
  0.543
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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