Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI77677.1 | SFI77708.1 | SAMN05421835_101749 | SAMN05421835_101750 | ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase. | Hypothetical protein. | 0.773 |
SFI77677.1 | SFI77730.1 | SAMN05421835_101749 | SAMN05421835_101751 | ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase. | Phospholipase_D-nuclease N-terminal. | 0.612 |
SFI77708.1 | SFI77677.1 | SAMN05421835_101750 | SAMN05421835_101749 | Hypothetical protein. | ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase. | 0.773 |
SFI77708.1 | SFI77730.1 | SAMN05421835_101750 | SAMN05421835_101751 | Hypothetical protein. | Phospholipase_D-nuclease N-terminal. | 0.542 |
SFI77730.1 | SFI77677.1 | SAMN05421835_101751 | SAMN05421835_101749 | Phospholipase_D-nuclease N-terminal. | ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase. | 0.612 |
SFI77730.1 | SFI77708.1 | SAMN05421835_101751 | SAMN05421835_101750 | Phospholipase_D-nuclease N-terminal. | Hypothetical protein. | 0.542 |