Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI57896.1 | SFI57921.1 | SAMN05421835_10178 | SAMN05421835_10179 | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | Alkaline phosphatase D. | 0.563 |
SFI57921.1 | SFI57896.1 | SAMN05421835_10179 | SAMN05421835_10178 | Alkaline phosphatase D. | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily. | 0.563 |
SFI57921.1 | SFJ73283.1 | SAMN05421835_10179 | SAMN05421835_10823 | Alkaline phosphatase D. | Glycerophosphoryl diester phosphodiesterase. | 0.595 |
SFI57921.1 | SFJ76151.1 | SAMN05421835_10179 | SAMN05421835_108155 | Alkaline phosphatase D. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.499 |
SFI57921.1 | SFK33039.1 | SAMN05421835_10179 | SAMN05421835_11882 | Alkaline phosphatase D. | Alkaline phosphatase D. | 0.741 |
SFI57921.1 | SFK77206.1 | SAMN05421835_10179 | SAMN05421835_1335 | Alkaline phosphatase D. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.758 |
SFI57921.1 | folE | SAMN05421835_10179 | SAMN05421835_1337 | Alkaline phosphatase D. | GTP cyclohydrolase I. | 0.738 |
SFI57921.1 | folE-2 | SAMN05421835_10179 | SAMN05421835_13941 | Alkaline phosphatase D. | GTP cyclohydrolase I. | 0.740 |
SFI57921.1 | nadK | SAMN05421835_10179 | SAMN05421835_102350 | Alkaline phosphatase D. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.499 |
SFI57921.1 | nadK-2 | SAMN05421835_10179 | SAMN05421835_1094 | Alkaline phosphatase D. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.499 |
SFI57921.1 | nadK-3 | SAMN05421835_10179 | SAMN05421835_1176 | Alkaline phosphatase D. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.499 |
SFJ73283.1 | SFI57921.1 | SAMN05421835_10823 | SAMN05421835_10179 | Glycerophosphoryl diester phosphodiesterase. | Alkaline phosphatase D. | 0.595 |
SFJ73283.1 | SFK33039.1 | SAMN05421835_10823 | SAMN05421835_11882 | Glycerophosphoryl diester phosphodiesterase. | Alkaline phosphatase D. | 0.451 |
SFJ73283.1 | SFK77206.1 | SAMN05421835_10823 | SAMN05421835_1335 | Glycerophosphoryl diester phosphodiesterase. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.445 |
SFJ76151.1 | SFI57921.1 | SAMN05421835_108155 | SAMN05421835_10179 | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Alkaline phosphatase D. | 0.499 |
SFJ76151.1 | SFK33039.1 | SAMN05421835_108155 | SAMN05421835_11882 | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Alkaline phosphatase D. | 0.499 |
SFK33039.1 | SFI57921.1 | SAMN05421835_11882 | SAMN05421835_10179 | Alkaline phosphatase D. | Alkaline phosphatase D. | 0.741 |
SFK33039.1 | SFJ73283.1 | SAMN05421835_11882 | SAMN05421835_10823 | Alkaline phosphatase D. | Glycerophosphoryl diester phosphodiesterase. | 0.451 |
SFK33039.1 | SFJ76151.1 | SAMN05421835_11882 | SAMN05421835_108155 | Alkaline phosphatase D. | ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.499 |
SFK33039.1 | SFK77206.1 | SAMN05421835_11882 | SAMN05421835_1335 | Alkaline phosphatase D. | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. | 0.924 |
page 1 of 3