Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI95025.1 | SFI95057.1 | SAMN05421835_102284 | SAMN05421835_102285 | CubicO group peptidase, beta-lactamase class C family. | DNA-binding transcriptional regulator, MerR family. | 0.661 |
SFI95025.1 | SFI95090.1 | SAMN05421835_102284 | SAMN05421835_102286 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.619 |
SFI95025.1 | SFI95113.1 | SAMN05421835_102284 | SAMN05421835_102287 | CubicO group peptidase, beta-lactamase class C family. | Hypothetical protein. | 0.458 |
SFI95057.1 | SFI95025.1 | SAMN05421835_102285 | SAMN05421835_102284 | DNA-binding transcriptional regulator, MerR family. | CubicO group peptidase, beta-lactamase class C family. | 0.661 |
SFI95057.1 | SFI95090.1 | SAMN05421835_102285 | SAMN05421835_102286 | DNA-binding transcriptional regulator, MerR family. | Hypothetical protein. | 0.773 |
SFI95057.1 | SFI95113.1 | SAMN05421835_102285 | SAMN05421835_102287 | DNA-binding transcriptional regulator, MerR family. | Hypothetical protein. | 0.530 |
SFI95057.1 | icmF | SAMN05421835_102285 | SAMN05421835_11260 | DNA-binding transcriptional regulator, MerR family. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.495 |
SFI95090.1 | SFI95025.1 | SAMN05421835_102286 | SAMN05421835_102284 | Hypothetical protein. | CubicO group peptidase, beta-lactamase class C family. | 0.619 |
SFI95090.1 | SFI95057.1 | SAMN05421835_102286 | SAMN05421835_102285 | Hypothetical protein. | DNA-binding transcriptional regulator, MerR family. | 0.773 |
SFI95090.1 | SFI95113.1 | SAMN05421835_102286 | SAMN05421835_102287 | Hypothetical protein. | Hypothetical protein. | 0.583 |
SFI95090.1 | SFJ00413.1 | SAMN05421835_102286 | SAMN05421835_102472 | Hypothetical protein. | Hypothetical protein. | 0.530 |
SFI95090.1 | SFJ17986.1 | SAMN05421835_102286 | SAMN05421835_103326 | Hypothetical protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.537 |
SFI95090.1 | SFJ30407.1 | SAMN05421835_102286 | SAMN05421835_104236 | Hypothetical protein. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.559 |
SFI95090.1 | SFK68206.1 | SAMN05421835_102286 | SAMN05421835_12881 | Hypothetical protein. | methylmalonyl-CoA mutase. | 0.583 |
SFI95090.1 | SFK68222.1 | SAMN05421835_102286 | SAMN05421835_12882 | Hypothetical protein. | methylmalonyl-CoA mutase. | 0.583 |
SFI95090.1 | SFK89874.1 | SAMN05421835_102286 | SAMN05421835_1437 | Hypothetical protein. | Threonine dehydratase. | 0.532 |
SFI95090.1 | icmF | SAMN05421835_102286 | SAMN05421835_11260 | Hypothetical protein. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.643 |
SFI95113.1 | SFI95025.1 | SAMN05421835_102287 | SAMN05421835_102284 | Hypothetical protein. | CubicO group peptidase, beta-lactamase class C family. | 0.458 |
SFI95113.1 | SFI95057.1 | SAMN05421835_102287 | SAMN05421835_102285 | Hypothetical protein. | DNA-binding transcriptional regulator, MerR family. | 0.530 |
SFI95113.1 | SFI95090.1 | SAMN05421835_102287 | SAMN05421835_102286 | Hypothetical protein. | Hypothetical protein. | 0.583 |
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