STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI99259.1Protein of unknown function. (73 aa)    
Predicted Functional Partners:
SFK12903.1
Hypothetical protein.
  
    0.778
SFJ08708.1
Hypothetical protein.
  
     0.774
SFK23846.1
PQQ-like domain-containing protein.
  
     0.773
SFK43462.1
Hypothetical protein.
  
     0.772
SFJ12402.1
Dienelactone hydrolase.
  
     0.770
SFJ19037.1
Hypothetical protein.
  
     0.770
SFK32965.1
Protein of unknown function.
  
     0.770
SFK47431.1
Hypothetical protein.
  
     0.767
SFK63033.1
Hypothetical protein.
  
     0.766
SFJ73408.1
Hypothetical protein.
  
     0.765
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.