STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ15540.1Acyl dehydratase; Belongs to the UPF0336 family. (151 aa)    
Predicted Functional Partners:
SFJ15509.1
MaoC like domain-containing protein.
 
 
 0.998
SFK07028.1
Acyl dehydratase.
 
 
 0.992
SFJ44721.1
Mycocerosic acid synthase/phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C.
  
 0.802
SFJ15580.1
Glucokinase.
       0.773
SFJ15615.1
Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
       0.773
SFJ15647.1
Amino acid transporter.
       0.773
SFI64194.1
Amino acid adenylation domain-containing protein.
    
 0.707
SFJ15440.1
mRNA interferase MazF.
       0.678
SFJ15478.1
Hypothetical protein.
       0.678
SFJ11963.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
     
 0.623
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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