STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ28529.1P-aminobenzoate N-oxygenase AurF. (304 aa)    
Predicted Functional Partners:
SFJ28505.1
ferredoxin--NADP+ reductase.
 
 
  0.973
SFJ40121.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 0.880
SFJ28477.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.813
SFK23957.1
Protein of unknown function.
 
     0.712
SFJ40190.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.677
SFJ63731.1
Ferredoxin-NADP reductase.
  
 0.667
SFJ42460.1
Cytochrome P450.
  
 0.665
SFJ81298.1
Ferredoxin-NADP reductase.
  
 0.665
SFI68467.1
Propane monooxygenase reductase subunit.
  
 0.663
SFI89633.1
Ferredoxin-NADP reductase.
  
 0.663
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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