STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ29360.1Ribose transport system ATP-binding protein/rhamnose transport system ATP-binding protein. (511 aa)    
Predicted Functional Partners:
SFJ29334.1
Ribose transport system permease protein/putative xylitol transport system permease protein.
  0.971
SFJ29306.1
Ribose transport system substrate-binding protein.
 
  0.951
SFI71041.1
Rhamnose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.915
SFI96596.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.915
SFK40672.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.914
SFJ25903.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.906
SFI71070.1
Rhamnose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.898
SFI56493.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.873
SFI70439.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.871
SFJ27430.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.868
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.