STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ29395.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (243 aa)    
Predicted Functional Partners:
xylB-2
Xylulokinase.
 
 
  0.816
SFJ29486.1
Phosphotriesterase-related protein.
 
     0.814
SFI64194.1
Amino acid adenylation domain-containing protein.
  
 0.804
SFK16926.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.767
SFJ44721.1
Mycocerosic acid synthase/phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C.
  
 0.721
SFI78733.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.686
SFI78905.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.644
SFI94070.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.643
SFJ98185.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.643
SFK35661.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.643
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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