STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ24310.1Phosphosulfolactate synthase. (243 aa)    
Predicted Functional Partners:
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
    0.837
SFI89119.1
Restriction system protein.
   
    0.812
SFJ24285.1
Surface polysaccharide O-acyltransferase, integral membrane enzyme.
 
     0.807
SFJ24260.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
    0.788
SFI67652.1
Formate dehydrogenase iron-sulfur subunit.
   
    0.741
SFJ24334.1
Hypothetical protein.
       0.740
SFJ24364.1
Probable phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
       0.711
SFJ24392.1
Hypothetical protein.
       0.579
SFJ24236.1
Polyhydroxybutyrate depolymerase.
       0.494
SFJ63365.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
     0.445
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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