STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ33223.1FAD dependent oxidoreductase. (457 aa)    
Predicted Functional Partners:
SFJ09072.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
  
 0.989
SFK96365.1
2-oxoglutarate decarboxylase.
  
 0.972
SFJ09154.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.963
SFK36682.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 0.963
SFK02773.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.954
SFJ09106.1
Succinate dehydrogenase / fumarate reductase membrane anchor subunit.
  
 0.908
SFK00472.1
Glycine/D-amino acid oxidase.
  
 0.866
SFJ17986.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.845
SFK22696.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.845
SFJ33171.1
Threonine dehydrogenase.
 
    0.807
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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