Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI77480.1 | SFJ33409.1 | SAMN05421835_101743 | SAMN05421835_104339 | Ribosome-associated translation inhibitor RaiA. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.489 |
SFJ07832.1 | SFJ33409.1 | SAMN05421835_1033 | SAMN05421835_104339 | Multimeric flavodoxin WrbA. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.478 |
SFJ33382.1 | SFJ33409.1 | SAMN05421835_104338 | SAMN05421835_104339 | Non-heme chloroperoxidase. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.713 |
SFJ33382.1 | SFJ33437.1 | SAMN05421835_104338 | SAMN05421835_104340 | Non-heme chloroperoxidase. | Hypothetical protein. | 0.668 |
SFJ33382.1 | SFJ33461.1 | SAMN05421835_104338 | SAMN05421835_104341 | Non-heme chloroperoxidase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.504 |
SFJ33409.1 | SFI77480.1 | SAMN05421835_104339 | SAMN05421835_101743 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Ribosome-associated translation inhibitor RaiA. | 0.489 |
SFJ33409.1 | SFJ07832.1 | SAMN05421835_104339 | SAMN05421835_1033 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Multimeric flavodoxin WrbA. | 0.478 |
SFJ33409.1 | SFJ33382.1 | SAMN05421835_104339 | SAMN05421835_104338 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Non-heme chloroperoxidase. | 0.713 |
SFJ33409.1 | SFJ33437.1 | SAMN05421835_104339 | SAMN05421835_104340 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Hypothetical protein. | 0.773 |
SFJ33409.1 | SFJ33461.1 | SAMN05421835_104339 | SAMN05421835_104341 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.659 |
SFJ33409.1 | SFJ78019.1 | SAMN05421835_104339 | SAMN05421835_108257 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Peroxiredoxin, Ohr subfamily. | 0.479 |
SFJ33409.1 | SFK16903.1 | SAMN05421835_104339 | SAMN05421835_1155 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Peroxiredoxin, Ohr subfamily. | 0.479 |
SFJ33409.1 | SFK93296.1 | SAMN05421835_104339 | SAMN05421835_14813 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Peroxiredoxin, Ohr subfamily. | 0.479 |
SFJ33409.1 | clpS | SAMN05421835_104339 | SAMN05421835_14915 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.889 |
SFJ33409.1 | hpf | SAMN05421835_104339 | SAMN05421835_12298 | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.489 |
SFJ33437.1 | SFJ33382.1 | SAMN05421835_104340 | SAMN05421835_104338 | Hypothetical protein. | Non-heme chloroperoxidase. | 0.668 |
SFJ33437.1 | SFJ33409.1 | SAMN05421835_104340 | SAMN05421835_104339 | Hypothetical protein. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.773 |
SFJ33437.1 | SFJ33461.1 | SAMN05421835_104340 | SAMN05421835_104341 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.578 |
SFJ33461.1 | SFJ33382.1 | SAMN05421835_104341 | SAMN05421835_104338 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Non-heme chloroperoxidase. | 0.504 |
SFJ33461.1 | SFJ33409.1 | SAMN05421835_104341 | SAMN05421835_104339 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Starvation-inducible DNA-binding protein; Belongs to the Dps family. | 0.659 |
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