Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI96264.1 | SFJ25745.1 | SAMN05421835_102331 | SAMN05421835_10473 | Starch phosphorylase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.789 |
SFI96264.1 | SFJ25776.1 | SAMN05421835_102331 | SAMN05421835_10474 | Starch phosphorylase. | Glycogen debranching enzyme (alpha-1,6-glucosidase). | 0.820 |
SFI96264.1 | SFJ81406.1 | SAMN05421835_102331 | SAMN05421835_1096 | Starch phosphorylase. | 4-alpha-glucanotransferase. | 0.978 |
SFI96264.1 | SFJ81617.1 | SAMN05421835_102331 | SAMN05421835_10916 | Starch phosphorylase. | Maltokinase. | 0.876 |
SFI96264.1 | SFK12852.1 | SAMN05421835_102331 | SAMN05421835_11468 | Starch phosphorylase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.921 |
SFI96264.1 | SFK56774.1 | SAMN05421835_102331 | SAMN05421835_12458 | Starch phosphorylase. | Glucose-1-phosphate cytidylyltransferase. | 0.924 |
SFI96264.1 | glgB | SAMN05421835_102331 | SAMN05421835_10917 | Starch phosphorylase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.996 |
SFI96264.1 | glgC | SAMN05421835_102331 | SAMN05421835_101221 | Starch phosphorylase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.995 |
SFI96264.1 | glgE | SAMN05421835_102331 | SAMN05421835_10914 | Starch phosphorylase. | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.895 |
SFJ25745.1 | SFI96264.1 | SAMN05421835_10473 | SAMN05421835_102331 | Glycosyltransferase involved in cell wall bisynthesis. | Starch phosphorylase. | 0.789 |
SFJ25745.1 | SFJ25776.1 | SAMN05421835_10473 | SAMN05421835_10474 | Glycosyltransferase involved in cell wall bisynthesis. | Glycogen debranching enzyme (alpha-1,6-glucosidase). | 0.953 |
SFJ25745.1 | SFJ81406.1 | SAMN05421835_10473 | SAMN05421835_1096 | Glycosyltransferase involved in cell wall bisynthesis. | 4-alpha-glucanotransferase. | 0.697 |
SFJ25745.1 | SFJ81617.1 | SAMN05421835_10473 | SAMN05421835_10916 | Glycosyltransferase involved in cell wall bisynthesis. | Maltokinase. | 0.716 |
SFJ25745.1 | SFJ85391.1 | SAMN05421835_10473 | SAMN05421835_109199 | Glycosyltransferase involved in cell wall bisynthesis. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.674 |
SFJ25745.1 | SFK12852.1 | SAMN05421835_10473 | SAMN05421835_11468 | Glycosyltransferase involved in cell wall bisynthesis. | UTP--glucose-1-phosphate uridylyltransferase. | 0.716 |
SFJ25745.1 | SFK56774.1 | SAMN05421835_10473 | SAMN05421835_12458 | Glycosyltransferase involved in cell wall bisynthesis. | Glucose-1-phosphate cytidylyltransferase. | 0.740 |
SFJ25745.1 | glgB | SAMN05421835_10473 | SAMN05421835_10917 | Glycosyltransferase involved in cell wall bisynthesis. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.686 |
SFJ25745.1 | glgC | SAMN05421835_10473 | SAMN05421835_101221 | Glycosyltransferase involved in cell wall bisynthesis. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.733 |
SFJ25745.1 | glgE | SAMN05421835_10473 | SAMN05421835_10914 | Glycosyltransferase involved in cell wall bisynthesis. | Starch synthase (maltosyl-transferring); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.785 |
SFJ25776.1 | SFI96264.1 | SAMN05421835_10474 | SAMN05421835_102331 | Glycogen debranching enzyme (alpha-1,6-glucosidase). | Starch phosphorylase. | 0.820 |
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