STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ41072.1DNA-binding transcriptional regulator, IclR family. (246 aa)    
Predicted Functional Partners:
SFJ89823.1
DNA-binding transcriptional regulator, IclR family.
  
     0.774
SFJ88374.1
IclR family transcriptional regulator, acetate operon repressor.
  
     0.774
SFK17565.1
DNA-binding transcriptional regulator, IclR family.
  
     0.774
SFK41285.1
DNA-binding transcriptional regulator, IclR family.
  
     0.774
SFK56627.1
IclR family transcriptional regulator, acetate operon repressor.
  
     0.774
SFK59748.1
DNA-binding transcriptional regulator, IclR family.
  
     0.774
SFK73940.1
DNA-binding transcriptional regulator, IclR family.
  
     0.774
SFI88481.1
DNA-binding transcriptional regulator, IclR family.
  
     0.773
SFJ64487.1
DNA-binding transcriptional regulator, IclR family.
  
     0.773
SFJ77163.1
DNA-binding transcriptional regulator, IclR family.
  
     0.773
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.