STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ37940.1Lysine N6-hydroxylase. (426 aa)    
Predicted Functional Partners:
SFJ37965.1
Siderophore synthetase component.
 
 
 0.987
SFJ37907.1
L-2,4-diaminobutyrate decarboxylase.
 
  
 0.942
SFI64194.1
Amino acid adenylation domain-containing protein.
  
 
 0.894
SFJ16154.1
MbtH protein.
  
  
 0.857
SFJ37985.1
Glutamine synthetase.
       0.774
SFJ44721.1
Mycocerosic acid synthase/phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C.
  
 
 0.685
SFI64223.1
Amino acid adenylation domain-containing protein.
  
 
 0.655
SFJ68556.1
Protein N-acetyltransferase, RimJ/RimL family.
 
 
 0.597
SFJ16021.1
Mycobactin phenyloxazoline synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.595
SFI55985.1
Hypothetical protein.
  
 
 0.522
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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