Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI74955.1 | SFJ00011.1 | SAMN05421835_101661 | SAMN05421835_102459 | Signal transduction histidine kinase. | Nuclease-related domain-containing protein. | 0.546 |
SFI74955.1 | SFJ41344.1 | SAMN05421835_101661 | SAMN05421835_105142 | Signal transduction histidine kinase. | Hypothetical protein. | 0.505 |
SFI74955.1 | SFJ55352.1 | SAMN05421835_101661 | SAMN05421835_106212 | Signal transduction histidine kinase. | Protein phosphatase. | 0.885 |
SFI74955.1 | SFJ55863.1 | SAMN05421835_101661 | SAMN05421835_106234 | Signal transduction histidine kinase. | Serine/threonine protein kinase. | 0.851 |
SFI74955.1 | SFJ68085.1 | SAMN05421835_101661 | SAMN05421835_107227 | Signal transduction histidine kinase. | 16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.830 |
SFI74955.1 | SFK28390.1 | SAMN05421835_101661 | SAMN05421835_11758 | Signal transduction histidine kinase. | 2-oxoisovalerate dehydrogenase E1 component. | 0.883 |
SFI74955.1 | SFK35814.1 | SAMN05421835_101661 | SAMN05421835_11912 | Signal transduction histidine kinase. | Serine/threonine protein kinase. | 0.851 |
SFI74955.1 | SFK51207.1 | SAMN05421835_101661 | SAMN05421835_12313 | Signal transduction histidine kinase. | Hypothetical protein. | 0.530 |
SFI74955.1 | dnaJ | SAMN05421835_101661 | SAMN05421835_108120 | Signal transduction histidine kinase. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.546 |
SFI74955.1 | dnaJ-2 | SAMN05421835_101661 | SAMN05421835_115193 | Signal transduction histidine kinase. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.546 |
SFJ00011.1 | SFI74955.1 | SAMN05421835_102459 | SAMN05421835_101661 | Nuclease-related domain-containing protein. | Signal transduction histidine kinase. | 0.546 |
SFJ00011.1 | SFJ55352.1 | SAMN05421835_102459 | SAMN05421835_106212 | Nuclease-related domain-containing protein. | Protein phosphatase. | 0.928 |
SFJ00011.1 | SFK51207.1 | SAMN05421835_102459 | SAMN05421835_12313 | Nuclease-related domain-containing protein. | Hypothetical protein. | 0.594 |
SFJ41344.1 | SFI74955.1 | SAMN05421835_105142 | SAMN05421835_101661 | Hypothetical protein. | Signal transduction histidine kinase. | 0.505 |
SFJ41344.1 | SFJ55352.1 | SAMN05421835_105142 | SAMN05421835_106212 | Hypothetical protein. | Protein phosphatase. | 0.927 |
SFJ41344.1 | SFK51207.1 | SAMN05421835_105142 | SAMN05421835_12313 | Hypothetical protein. | Hypothetical protein. | 0.406 |
SFJ55352.1 | SFI74955.1 | SAMN05421835_106212 | SAMN05421835_101661 | Protein phosphatase. | Signal transduction histidine kinase. | 0.885 |
SFJ55352.1 | SFJ00011.1 | SAMN05421835_106212 | SAMN05421835_102459 | Protein phosphatase. | Nuclease-related domain-containing protein. | 0.928 |
SFJ55352.1 | SFJ41344.1 | SAMN05421835_106212 | SAMN05421835_105142 | Protein phosphatase. | Hypothetical protein. | 0.927 |
SFJ55352.1 | SFJ55863.1 | SAMN05421835_106212 | SAMN05421835_106234 | Protein phosphatase. | Serine/threonine protein kinase. | 0.988 |
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