Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ40121.1 | SFJ42460.1 | SAMN05421835_10598 | SAMN05421835_105186 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | Cytochrome P450. | 0.756 |
SFJ40121.1 | SFJ66430.1 | SAMN05421835_10598 | SAMN05421835_107158 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | Metal-sulfur cluster biosynthetic enzyme. | 0.659 |
SFJ40121.1 | SFJ81298.1 | SAMN05421835_10598 | SAMN05421835_1091 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | Ferredoxin-NADP reductase. | 0.785 |
SFJ40121.1 | SFK75955.1 | SAMN05421835_10598 | SAMN05421835_13240 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | Hypothetical protein. | 0.813 |
SFJ42460.1 | SFJ40121.1 | SAMN05421835_105186 | SAMN05421835_10598 | Cytochrome P450. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.756 |
SFJ42460.1 | SFJ66430.1 | SAMN05421835_105186 | SAMN05421835_107158 | Cytochrome P450. | Metal-sulfur cluster biosynthetic enzyme. | 0.608 |
SFJ42460.1 | SFJ66457.1 | SAMN05421835_105186 | SAMN05421835_107159 | Cytochrome P450. | Nitrogen fixation protein NifU. | 0.813 |
SFJ42460.1 | SFJ81298.1 | SAMN05421835_105186 | SAMN05421835_1091 | Cytochrome P450. | Ferredoxin-NADP reductase. | 0.985 |
SFJ42460.1 | SFK75955.1 | SAMN05421835_105186 | SAMN05421835_13240 | Cytochrome P450. | Hypothetical protein. | 0.874 |
SFJ66430.1 | SFJ40121.1 | SAMN05421835_107158 | SAMN05421835_10598 | Metal-sulfur cluster biosynthetic enzyme. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.659 |
SFJ66430.1 | SFJ42460.1 | SAMN05421835_107158 | SAMN05421835_105186 | Metal-sulfur cluster biosynthetic enzyme. | Cytochrome P450. | 0.608 |
SFJ66430.1 | SFJ66457.1 | SAMN05421835_107158 | SAMN05421835_107159 | Metal-sulfur cluster biosynthetic enzyme. | Nitrogen fixation protein NifU. | 0.995 |
SFJ66430.1 | SFJ66481.1 | SAMN05421835_107158 | SAMN05421835_107160 | Metal-sulfur cluster biosynthetic enzyme. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.944 |
SFJ66430.1 | SFJ66503.1 | SAMN05421835_107158 | SAMN05421835_107161 | Metal-sulfur cluster biosynthetic enzyme. | Fe-S cluster assembly ATP-binding protein. | 0.951 |
SFJ66430.1 | SFJ66531.1 | SAMN05421835_107158 | SAMN05421835_107162 | Metal-sulfur cluster biosynthetic enzyme. | Fe-S cluster assembly protein SufD. | 0.922 |
SFJ66430.1 | SFJ66560.1 | SAMN05421835_107158 | SAMN05421835_107163 | Metal-sulfur cluster biosynthetic enzyme. | Fe-S cluster assembly protein SufB. | 0.942 |
SFJ66430.1 | SFJ66582.1 | SAMN05421835_107158 | SAMN05421835_107164 | Metal-sulfur cluster biosynthetic enzyme. | Predicted transcriptional regulator, ArsR family. | 0.674 |
SFJ66430.1 | SFJ81298.1 | SAMN05421835_107158 | SAMN05421835_1091 | Metal-sulfur cluster biosynthetic enzyme. | Ferredoxin-NADP reductase. | 0.608 |
SFJ66430.1 | SFK75955.1 | SAMN05421835_107158 | SAMN05421835_13240 | Metal-sulfur cluster biosynthetic enzyme. | Hypothetical protein. | 0.624 |
SFJ66457.1 | SFJ42460.1 | SAMN05421835_107159 | SAMN05421835_105186 | Nitrogen fixation protein NifU. | Cytochrome P450. | 0.813 |
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