STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ66503.1Fe-S cluster assembly ATP-binding protein. (256 aa)    
Predicted Functional Partners:
SFJ66531.1
Fe-S cluster assembly protein SufD.
 
 
 0.999
SFJ66560.1
Fe-S cluster assembly protein SufB.
 
 0.999
SFJ66457.1
Nitrogen fixation protein NifU.
 
  
 0.994
SFJ66481.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.972
SFJ66430.1
Metal-sulfur cluster biosynthetic enzyme.
 
  
 0.951
SFK86517.1
Selenocysteine lyase/Cysteine desulfurase.
 
  
 0.913
SFJ91397.1
Cysteine desulfurase family protein, VC1184 subfamily.
 
  
 0.888
SFJ81953.1
Cysteine desulfurase family protein, VC1184 subfamily.
 
  
 0.880
SFI88298.1
Selenocysteine lyase/Cysteine desulfurase.
 
  
 0.826
SFJ66582.1
Predicted transcriptional regulator, ArsR family.
  
    0.794
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.