STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ75818.1DNA-binding transcriptional regulator, AcrR family. (182 aa)    
Predicted Functional Partners:
SFJ75839.1
NADPH2:quinone reductase.
       0.773
SFJ75860.1
CubicO group peptidase, beta-lactamase class C family.
       0.613
SFJ75794.1
Trypsin.
       0.565
SFK32547.1
Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family.
  
     0.504
SFK36250.1
EamA-like transporter family protein.
  
     0.503
SFK49471.1
EPTP domain-containing protein.
  
     0.456
SFI99383.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.447
SFI87500.1
Transcriptional regulator, TetR family.
  
     0.402
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.