STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ76446.1Phage integrase, N-terminal SAM-like domain; Belongs to the 'phage' integrase family. (439 aa)    
Predicted Functional Partners:
SFJ76465.1
DNA binding domain-containing protein, excisionase family.
 
   
 0.926
SFJ91277.1
DNA binding domain-containing protein, excisionase family.
 
   
 0.746
SFJ54794.1
Protein of unknown function.
 
     0.639
SFJ91216.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
     0.569
SFJ76574.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
     0.524
SFJ91254.1
Protein of unknown function.
 
     0.524
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.489
SFJ54896.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
     0.472
SFJ89104.1
Prephenate dehydrogenase.
  
    0.467
SFK33378.1
ATP-dependent DNA helicase RecQ.
  
    0.464
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.