Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ24192.1 | SFJ54178.1 | SAMN05421835_10417 | SAMN05421835_106167 | Membrane associated serine protease, rhomboid family. | N-acetylmuramoyl-L-alanine amidase. | 0.706 |
SFJ24192.1 | SFJ55606.1 | SAMN05421835_10417 | SAMN05421835_106223 | Membrane associated serine protease, rhomboid family. | Membrane associated serine protease, rhomboid family. | 0.429 |
SFJ24192.1 | SFJ77422.1 | SAMN05421835_10417 | SAMN05421835_108227 | Membrane associated serine protease, rhomboid family. | N-acetylmuramoyl-L-alanine amidase. | 0.700 |
SFJ54178.1 | SFJ24192.1 | SAMN05421835_106167 | SAMN05421835_10417 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.706 |
SFJ54178.1 | SFJ55606.1 | SAMN05421835_106167 | SAMN05421835_106223 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.706 |
SFJ54178.1 | SFJ77422.1 | SAMN05421835_106167 | SAMN05421835_108227 | N-acetylmuramoyl-L-alanine amidase. | N-acetylmuramoyl-L-alanine amidase. | 0.960 |
SFJ54178.1 | SFK48128.1 | SAMN05421835_106167 | SAMN05421835_12260 | N-acetylmuramoyl-L-alanine amidase. | MucB/RseB family protein. | 0.862 |
SFJ54178.1 | SFK71104.1 | SAMN05421835_106167 | SAMN05421835_1302 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.706 |
SFJ54178.1 | SFK79982.1 | SAMN05421835_106167 | SAMN05421835_13461 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.706 |
SFJ54178.1 | SFK92912.1 | SAMN05421835_106167 | SAMN05421835_14714 | N-acetylmuramoyl-L-alanine amidase. | Rhomboid family protein. | 0.706 |
SFJ54178.1 | recR | SAMN05421835_106167 | SAMN05421835_108229 | N-acetylmuramoyl-L-alanine amidase. | DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.404 |
SFJ55606.1 | SFJ24192.1 | SAMN05421835_106223 | SAMN05421835_10417 | Membrane associated serine protease, rhomboid family. | Membrane associated serine protease, rhomboid family. | 0.429 |
SFJ55606.1 | SFJ54178.1 | SAMN05421835_106223 | SAMN05421835_106167 | Membrane associated serine protease, rhomboid family. | N-acetylmuramoyl-L-alanine amidase. | 0.706 |
SFJ55606.1 | SFJ77422.1 | SAMN05421835_106223 | SAMN05421835_108227 | Membrane associated serine protease, rhomboid family. | N-acetylmuramoyl-L-alanine amidase. | 0.700 |
SFJ77422.1 | SFJ24192.1 | SAMN05421835_108227 | SAMN05421835_10417 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.700 |
SFJ77422.1 | SFJ54178.1 | SAMN05421835_108227 | SAMN05421835_106167 | N-acetylmuramoyl-L-alanine amidase. | N-acetylmuramoyl-L-alanine amidase. | 0.960 |
SFJ77422.1 | SFJ55606.1 | SAMN05421835_108227 | SAMN05421835_106223 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.700 |
SFJ77422.1 | SFJ98260.1 | SAMN05421835_108227 | SAMN05421835_111199 | N-acetylmuramoyl-L-alanine amidase. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.593 |
SFJ77422.1 | SFK48128.1 | SAMN05421835_108227 | SAMN05421835_12260 | N-acetylmuramoyl-L-alanine amidase. | MucB/RseB family protein. | 0.857 |
SFJ77422.1 | SFK71104.1 | SAMN05421835_108227 | SAMN05421835_1302 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.700 |
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