Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ74423.1 | SFJ74443.1 | SAMN05421835_10874 | SAMN05421835_10875 | L-rhamnose isomerase / sugar isomerase. | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | 0.975 |
SFJ74423.1 | SFJ74465.1 | SAMN05421835_10874 | SAMN05421835_10876 | L-rhamnose isomerase / sugar isomerase. | Rhamnulokinase. | 0.980 |
SFJ74423.1 | SFJ74490.1 | SAMN05421835_10874 | SAMN05421835_10877 | L-rhamnose isomerase / sugar isomerase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.664 |
SFJ74423.1 | SFJ74510.1 | SAMN05421835_10874 | SAMN05421835_10878 | L-rhamnose isomerase / sugar isomerase. | Hypothetical protein. | 0.469 |
SFJ74423.1 | SFJ74537.1 | SAMN05421835_10874 | SAMN05421835_10879 | L-rhamnose isomerase / sugar isomerase. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.419 |
SFJ74443.1 | SFJ74423.1 | SAMN05421835_10875 | SAMN05421835_10874 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | L-rhamnose isomerase / sugar isomerase. | 0.975 |
SFJ74443.1 | SFJ74465.1 | SAMN05421835_10875 | SAMN05421835_10876 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Rhamnulokinase. | 0.983 |
SFJ74443.1 | SFJ74490.1 | SAMN05421835_10875 | SAMN05421835_10877 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.673 |
SFJ74443.1 | SFJ74510.1 | SAMN05421835_10875 | SAMN05421835_10878 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Hypothetical protein. | 0.469 |
SFJ74443.1 | SFJ74537.1 | SAMN05421835_10875 | SAMN05421835_10879 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.461 |
SFJ74465.1 | SFJ74423.1 | SAMN05421835_10876 | SAMN05421835_10874 | Rhamnulokinase. | L-rhamnose isomerase / sugar isomerase. | 0.980 |
SFJ74465.1 | SFJ74443.1 | SAMN05421835_10876 | SAMN05421835_10875 | Rhamnulokinase. | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | 0.983 |
SFJ74465.1 | SFJ74490.1 | SAMN05421835_10876 | SAMN05421835_10877 | Rhamnulokinase. | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | 0.664 |
SFJ74465.1 | SFJ74510.1 | SAMN05421835_10876 | SAMN05421835_10878 | Rhamnulokinase. | Hypothetical protein. | 0.469 |
SFJ74465.1 | SFJ74537.1 | SAMN05421835_10876 | SAMN05421835_10879 | Rhamnulokinase. | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.419 |
SFJ74490.1 | SFJ74423.1 | SAMN05421835_10877 | SAMN05421835_10874 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | L-rhamnose isomerase / sugar isomerase. | 0.664 |
SFJ74490.1 | SFJ74443.1 | SAMN05421835_10877 | SAMN05421835_10875 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. | 0.673 |
SFJ74490.1 | SFJ74465.1 | SAMN05421835_10877 | SAMN05421835_10876 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Rhamnulokinase. | 0.664 |
SFJ74490.1 | SFJ74510.1 | SAMN05421835_10877 | SAMN05421835_10878 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Hypothetical protein. | 0.538 |
SFJ74490.1 | SFJ74537.1 | SAMN05421835_10877 | SAMN05421835_10879 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.483 |
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