STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ84482.1Glutamate transport system substrate-binding protein. (272 aa)    
Predicted Functional Partners:
SFK36898.1
Glutamate transport system permease protein.
 
 0.995
SFK36879.1
Glutamate transport system permease protein.
 
 0.981
SFK36935.1
Glutamate transport system ATP-binding protein.
 
 0.976
SFJ25661.1
Polar amino acid transport system ATP-binding protein.
 
 0.932
SFJ43163.1
Polar amino acid transport system ATP-binding protein.
 
 0.930
SFJ57503.1
Polar amino acid transport system ATP-binding protein.
 
 0.930
SFK64958.1
Polar amino acid transport system ATP-binding protein.
 
 
  0.915
SFJ25641.1
Polar amino acid transport system permease protein.
 
 0.898
SFJ43143.1
Polar amino acid transport system permease protein.
 
 0.897
SFJ57474.1
Polar amino acid transport system permease protein.
 
 0.894
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.