STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ89916.1Copper ion binding protein. (67 aa)    
Predicted Functional Partners:
SFJ89894.1
Cu+-exporting ATPase.
 
 
 0.978
SFJ63276.1
Cu+-exporting ATPase.
 
 
 0.913
SFI77677.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase.
  
 
 0.884
SFK13148.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.884
SFJ01046.1
Plasma-membrane calcium-translocating P-type ATPase.
  
 
 0.882
SFJ89964.1
DNA-binding transcriptional regulator, FrmR family.
 
  
 0.756
SFK70092.1
Predicted transcriptional regulator.
  
  
 0.705
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.699
SFJ89939.1
High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
     
 0.652
SFK62333.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.525
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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