STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ98053.1L-lactate dehydrogenase complex protein LldG. (204 aa)    
Predicted Functional Partners:
SFJ98068.1
L-lactate dehydrogenase complex protein LldF.
 
 0.999
SFJ98089.1
L-lactate dehydrogenase complex protein LldE.
 
 0.990
SFJ88271.1
Glycolate oxidase iron-sulfur subunit.
 
 
 0.849
SFI93735.1
FAD/FMN-containing dehydrogenase.
 
 
 0.805
SFK07514.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.800
SFJ98110.1
Hypothetical protein; Belongs to the cytochrome P450 family.
       0.768
SFJ98127.1
Ferredoxin-NADP reductase.
       0.756
SFI76467.1
4Fe-4S dicluster containing protein.
  
 
 0.704
SFJ75243.1
Fe-S oxidoreductase.
  
 
 0.704
SFI89147.1
Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.698
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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