STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ95963.1Predicted arabinose efflux permease, MFS family. (466 aa)    
Predicted Functional Partners:
SFJ95942.1
L-lactate dehydrogenase (cytochrome).
  
    0.774
SFJ32399.1
MFS transporter, putative metabolite:H+ symporter.
  
     0.755
SFK71476.1
MFS transporter, AAHS family, 4-hydroxybenzoate transporter.
  
     0.706
SFK87882.1
Benzoate transport.
  
     0.617
SFJ95979.1
Cystathione beta-lyase.
       0.588
SFJ95995.1
Protein of unknown function.
       0.588
SFK79678.1
Predicted arabinose efflux permease, MFS family.
  
  
  0.519
SFJ64239.1
Sugar phosphate permease.
  
  
  0.462
SFJ96013.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
       0.431
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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