STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK08398.1Gluconolactonase. (282 aa)    
Predicted Functional Partners:
SFK25141.1
Gluconokinase.
    
 0.843
SFK08379.1
fatty-acyl-CoA synthase.
 
 
   0.820
SFI70102.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
 
  0.794
SFK08340.1
Acetyl-CoA acetyltransferase.
       0.752
SFK08358.1
Hypothetical protein.
       0.752
xylB-2
Xylulokinase.
 
 
  0.683
SFK40747.1
Xylulokinase; Belongs to the FGGY kinase family.
  
 
  0.642
SFI97987.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
   
 
  0.641
SFI99177.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
   
 
  0.641
SFI97741.1
Aldo/keto reductase.
  
 
  0.623
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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