STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK09728.1Peptide/nickel transport system substrate-binding protein. (527 aa)    
Predicted Functional Partners:
SFK09694.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.976
SFK09709.1
Peptide/nickel transport system permease protein.
  0.956
SFJ83637.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.910
SFK09673.1
ABC transporter.
 
 
  0.881
SFI62390.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.854
SFJ83611.1
Peptide/nickel transport system permease protein.
  0.838
SFK65232.1
Peptide/nickel transport system permease protein.
 
  0.828
SFI62365.1
Peptide/nickel transport system permease protein.
 
  0.824
SFJ97012.1
Peptide/nickel transport system permease protein.
  0.824
SFK65214.1
Peptide/nickel transport system permease protein.
 
  0.824
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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