Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ57684.1 | SFK13089.1 | SAMN05421835_106313 | SAMN05421835_11481 | Signal peptide peptidase SppA. | Putative membrane protein. | 0.445 |
SFJ57684.1 | SFK13108.1 | SAMN05421835_106313 | SAMN05421835_11482 | Signal peptide peptidase SppA. | Hypothetical protein. | 0.491 |
SFJ57684.1 | SFK23682.1 | SAMN05421835_106313 | SAMN05421835_11668 | Signal peptide peptidase SppA. | Membrane protein YdbS, contains bPH2 (pleckstrin homology) domain. | 0.549 |
SFJ57684.1 | SFK66982.1 | SAMN05421835_106313 | SAMN05421835_12826 | Signal peptide peptidase SppA. | PH domain-containing protein. | 0.445 |
SFK13068.1 | SFK13089.1 | SAMN05421835_11480 | SAMN05421835_11481 | Predicted membrane protein. | Putative membrane protein. | 0.618 |
SFK13068.1 | SFK13108.1 | SAMN05421835_11480 | SAMN05421835_11482 | Predicted membrane protein. | Hypothetical protein. | 0.620 |
SFK13068.1 | SFK13131.1 | SAMN05421835_11480 | SAMN05421835_11483 | Predicted membrane protein. | DNA-binding transcriptional regulator, ArsR family. | 0.580 |
SFK13089.1 | SFJ57684.1 | SAMN05421835_11481 | SAMN05421835_106313 | Putative membrane protein. | Signal peptide peptidase SppA. | 0.445 |
SFK13089.1 | SFK13068.1 | SAMN05421835_11481 | SAMN05421835_11480 | Putative membrane protein. | Predicted membrane protein. | 0.618 |
SFK13089.1 | SFK13108.1 | SAMN05421835_11481 | SAMN05421835_11482 | Putative membrane protein. | Hypothetical protein. | 0.985 |
SFK13089.1 | SFK13131.1 | SAMN05421835_11481 | SAMN05421835_11483 | Putative membrane protein. | DNA-binding transcriptional regulator, ArsR family. | 0.775 |
SFK13089.1 | SFK13148.1 | SAMN05421835_11481 | SAMN05421835_11484 | Putative membrane protein. | ATPase, P-type (transporting), HAD superfamily, subfamily IC. | 0.563 |
SFK13089.1 | SFK13168.1 | SAMN05421835_11481 | SAMN05421835_11485 | Putative membrane protein. | aromatic-L-amino-acid decarboxylase. | 0.449 |
SFK13108.1 | SFJ57684.1 | SAMN05421835_11482 | SAMN05421835_106313 | Hypothetical protein. | Signal peptide peptidase SppA. | 0.491 |
SFK13108.1 | SFK13068.1 | SAMN05421835_11482 | SAMN05421835_11480 | Hypothetical protein. | Predicted membrane protein. | 0.620 |
SFK13108.1 | SFK13089.1 | SAMN05421835_11482 | SAMN05421835_11481 | Hypothetical protein. | Putative membrane protein. | 0.985 |
SFK13108.1 | SFK13131.1 | SAMN05421835_11482 | SAMN05421835_11483 | Hypothetical protein. | DNA-binding transcriptional regulator, ArsR family. | 0.773 |
SFK13108.1 | SFK13148.1 | SAMN05421835_11482 | SAMN05421835_11484 | Hypothetical protein. | ATPase, P-type (transporting), HAD superfamily, subfamily IC. | 0.632 |
SFK13108.1 | SFK13168.1 | SAMN05421835_11482 | SAMN05421835_11485 | Hypothetical protein. | aromatic-L-amino-acid decarboxylase. | 0.449 |
SFK13108.1 | SFK23682.1 | SAMN05421835_11482 | SAMN05421835_11668 | Hypothetical protein. | Membrane protein YdbS, contains bPH2 (pleckstrin homology) domain. | 0.685 |
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