Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK34212.1 | SFK34235.1 | SAMN05421835_118134 | SAMN05421835_118135 | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.615 |
SFK34212.1 | SFK34257.1 | SAMN05421835_118134 | SAMN05421835_118136 | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Hypothetical protein. | 0.615 |
SFK34212.1 | SFK34273.1 | SAMN05421835_118134 | SAMN05421835_118137 | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Hypothetical protein. | 0.427 |
SFK34235.1 | SFK34212.1 | SAMN05421835_118135 | SAMN05421835_118134 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.615 |
SFK34235.1 | SFK34257.1 | SAMN05421835_118135 | SAMN05421835_118136 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.773 |
SFK34235.1 | SFK34273.1 | SAMN05421835_118135 | SAMN05421835_118137 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.523 |
SFK34235.1 | SFK34315.1 | SAMN05421835_118135 | SAMN05421835_118139 | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | Putative ABC transport system permease protein. | 0.473 |
SFK34257.1 | SFK34212.1 | SAMN05421835_118136 | SAMN05421835_118134 | Hypothetical protein. | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.615 |
SFK34257.1 | SFK34235.1 | SAMN05421835_118136 | SAMN05421835_118135 | Hypothetical protein. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
SFK34257.1 | SFK34273.1 | SAMN05421835_118136 | SAMN05421835_118137 | Hypothetical protein. | Hypothetical protein. | 0.523 |
SFK34273.1 | SFK34212.1 | SAMN05421835_118137 | SAMN05421835_118134 | Hypothetical protein. | Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.427 |
SFK34273.1 | SFK34235.1 | SAMN05421835_118137 | SAMN05421835_118135 | Hypothetical protein. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.523 |
SFK34273.1 | SFK34257.1 | SAMN05421835_118137 | SAMN05421835_118136 | Hypothetical protein. | Hypothetical protein. | 0.523 |
SFK34273.1 | SFK34291.1 | SAMN05421835_118137 | SAMN05421835_118138 | Hypothetical protein. | Putative ABC transport system ATP-binding protein. | 0.570 |
SFK34273.1 | SFK34315.1 | SAMN05421835_118137 | SAMN05421835_118139 | Hypothetical protein. | Putative ABC transport system permease protein. | 0.570 |
SFK34291.1 | SFK34273.1 | SAMN05421835_118138 | SAMN05421835_118137 | Putative ABC transport system ATP-binding protein. | Hypothetical protein. | 0.570 |
SFK34291.1 | SFK34315.1 | SAMN05421835_118138 | SAMN05421835_118139 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.975 |
SFK34315.1 | SFK34235.1 | SAMN05421835_118139 | SAMN05421835_118135 | Putative ABC transport system permease protein. | RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. | 0.473 |
SFK34315.1 | SFK34273.1 | SAMN05421835_118139 | SAMN05421835_118137 | Putative ABC transport system permease protein. | Hypothetical protein. | 0.570 |
SFK34315.1 | SFK34291.1 | SAMN05421835_118139 | SAMN05421835_118138 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.975 |