STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK32599.1S-formylglutathione hydrolase FrmB. (297 aa)    
Predicted Functional Partners:
SFK95467.1
Hypothetical protein.
  
     0.730
fdhD
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.700
SFJ55509.1
Protein of unknown function.
  
     0.684
SFK38195.1
Hypothetical protein.
  
     0.674
SFK14360.1
Hypothetical protein.
  
     0.658
SFJ68532.1
Hypothetical protein.
  
     0.654
SFI75811.1
NADPH-dependent glutamate synthase beta chain.
   
 
  0.638
SFI92060.1
Hypothetical protein.
  
     0.638
SFK62242.1
Protein of unknown function.
  
     0.624
SFI79081.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 0.617
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.