Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ52584.1 | SFJ56357.1 | SAMN05421835_106102 | SAMN05421835_106256 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ52584.1 | SFJ56547.1 | SAMN05421835_106102 | SAMN05421835_106264 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ52584.1 | SFJ76406.1 | SAMN05421835_106102 | SAMN05421835_108169 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ52584.1 | SFK25471.1 | SAMN05421835_106102 | SAMN05421835_116149 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ52584.1 | SFK40620.1 | SAMN05421835_106102 | SAMN05421835_12074 | Hypothetical protein. | RES domain-containing protein. | 0.765 |
SFJ52584.1 | SFK40639.1 | SAMN05421835_106102 | SAMN05421835_12075 | Hypothetical protein. | Hypothetical protein. | 0.766 |
SFJ54554.1 | SFJ85391.1 | SAMN05421835_106181 | SAMN05421835_109199 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.986 |
SFJ54554.1 | SFK32128.1 | SAMN05421835_106181 | SAMN05421835_11843 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | DNA-binding transcriptional regulator, MerR family. | 0.893 |
SFJ54554.1 | SFK40620.1 | SAMN05421835_106181 | SAMN05421835_12074 | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | RES domain-containing protein. | 0.833 |
SFJ56357.1 | SFJ52584.1 | SAMN05421835_106256 | SAMN05421835_106102 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56357.1 | SFJ56547.1 | SAMN05421835_106256 | SAMN05421835_106264 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56357.1 | SFJ76406.1 | SAMN05421835_106256 | SAMN05421835_108169 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56357.1 | SFK25471.1 | SAMN05421835_106256 | SAMN05421835_116149 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56357.1 | SFK40620.1 | SAMN05421835_106256 | SAMN05421835_12074 | Hypothetical protein. | RES domain-containing protein. | 0.772 |
SFJ56357.1 | SFK40639.1 | SAMN05421835_106256 | SAMN05421835_12075 | Hypothetical protein. | Hypothetical protein. | 0.772 |
SFJ56547.1 | SFJ52584.1 | SAMN05421835_106264 | SAMN05421835_106102 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56547.1 | SFJ56357.1 | SAMN05421835_106264 | SAMN05421835_106256 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56547.1 | SFJ76406.1 | SAMN05421835_106264 | SAMN05421835_108169 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56547.1 | SFK25471.1 | SAMN05421835_106264 | SAMN05421835_116149 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SFJ56547.1 | SFK40620.1 | SAMN05421835_106264 | SAMN05421835_12074 | Hypothetical protein. | RES domain-containing protein. | 0.765 |
page 1 of 3