Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI60703.1 | SFK43982.1 | SAMN05421835_101174 | SAMN05421835_12148 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | D-alanyl-D-alanine carboxypeptidase. | 0.584 |
SFI71919.1 | SFK43982.1 | SAMN05421835_101561 | SAMN05421835_12148 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | D-alanyl-D-alanine carboxypeptidase. | 0.517 |
SFK43944.1 | SFK43964.1 | SAMN05421835_12146 | SAMN05421835_12147 | ElaA protein. | Trypsin. | 0.791 |
SFK43944.1 | SFK43982.1 | SAMN05421835_12146 | SAMN05421835_12148 | ElaA protein. | D-alanyl-D-alanine carboxypeptidase. | 0.548 |
SFK43944.1 | SFK44001.1 | SAMN05421835_12146 | SAMN05421835_12149 | ElaA protein. | Mycothione reductase. | 0.473 |
SFK43964.1 | SFK43944.1 | SAMN05421835_12147 | SAMN05421835_12146 | Trypsin. | ElaA protein. | 0.791 |
SFK43964.1 | SFK43982.1 | SAMN05421835_12147 | SAMN05421835_12148 | Trypsin. | D-alanyl-D-alanine carboxypeptidase. | 0.549 |
SFK43964.1 | SFK44001.1 | SAMN05421835_12147 | SAMN05421835_12149 | Trypsin. | Mycothione reductase. | 0.424 |
SFK43982.1 | SFI60703.1 | SAMN05421835_12148 | SAMN05421835_101174 | D-alanyl-D-alanine carboxypeptidase. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.584 |
SFK43982.1 | SFI71919.1 | SAMN05421835_12148 | SAMN05421835_101561 | D-alanyl-D-alanine carboxypeptidase. | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.517 |
SFK43982.1 | SFK43944.1 | SAMN05421835_12148 | SAMN05421835_12146 | D-alanyl-D-alanine carboxypeptidase. | ElaA protein. | 0.548 |
SFK43982.1 | SFK43964.1 | SAMN05421835_12148 | SAMN05421835_12147 | D-alanyl-D-alanine carboxypeptidase. | Trypsin. | 0.549 |
SFK43982.1 | SFK44001.1 | SAMN05421835_12148 | SAMN05421835_12149 | D-alanyl-D-alanine carboxypeptidase. | Mycothione reductase. | 0.596 |
SFK43982.1 | SFK93813.1 | SAMN05421835_12148 | SAMN05421835_14914 | D-alanyl-D-alanine carboxypeptidase. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.584 |
SFK43982.1 | SFK94377.1 | SAMN05421835_12148 | SAMN05421835_15014 | D-alanyl-D-alanine carboxypeptidase. | Hypothetical protein. | 0.551 |
SFK44001.1 | SFK43944.1 | SAMN05421835_12149 | SAMN05421835_12146 | Mycothione reductase. | ElaA protein. | 0.473 |
SFK44001.1 | SFK43964.1 | SAMN05421835_12149 | SAMN05421835_12147 | Mycothione reductase. | Trypsin. | 0.424 |
SFK44001.1 | SFK43982.1 | SAMN05421835_12149 | SAMN05421835_12148 | Mycothione reductase. | D-alanyl-D-alanine carboxypeptidase. | 0.596 |
SFK93813.1 | SFK43982.1 | SAMN05421835_14914 | SAMN05421835_12148 | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | D-alanyl-D-alanine carboxypeptidase. | 0.584 |
SFK94377.1 | SFK43982.1 | SAMN05421835_15014 | SAMN05421835_12148 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase. | 0.551 |