STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK44229.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
SFK51207.1
Hypothetical protein.
    
 0.818
SFK44244.1
LGFP repeat-containing protein.
    
  0.683
SFK20111.1
Serpin B; Belongs to the serpin family.
   
 0.673
SFK44210.1
Short repeat-containing protein of unknown function.
     
 0.554
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.543
SFJ87913.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
    
  0.509
SFK53804.1
Hypothetical protein.
    
  0.509
SFK89050.1
Hypothetical protein.
    
  0.509
SFI91636.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 
  0.474
SFK95994.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
 
  0.474
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.