STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK48903.1Two-component system, OmpR family, response regulator MtrA. (227 aa)    
Predicted Functional Partners:
SFK48922.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.988
SFI74955.1
Signal transduction histidine kinase.
  
0.972
SFJ32684.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 
  0.972
SFJ77093.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.961
SFI70962.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
 0.945
SFK82511.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.936
SFK08772.1
Signal transduction histidine kinase.
 
 0.878
SFJ83379.1
Two-component system, OmpR family, sensor kinase.
  0.873
SFK03949.1
Signal transduction histidine kinase.
 
 0.871
SFI77420.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.869
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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