STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK52306.1Hypothetical protein; Belongs to the 'phage' integrase family. (471 aa)    
Predicted Functional Partners:
SFJ58650.1
Hypothetical protein.
  
     0.639
SFJ75749.1
TROVE domain-containing protein.
  
     0.618
SFJ75773.1
Hypothetical protein.
  
     0.608
SFK18889.1
Hemerythrin HHE cation binding domain-containing protein.
  
     0.564
SFK33378.1
ATP-dependent DNA helicase RecQ.
 
    0.535
SFK52459.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
     0.522
SFJ41344.1
Hypothetical protein.
 
    0.517
SFJ91254.1
Protein of unknown function.
 
     0.503
SFK55468.1
Helix-turn-helix domain-containing protein.
  
     0.494
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.489
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.