STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK59270.1Uncharacterized integral membrane protein. (96 aa)    
Predicted Functional Partners:
SFK59250.1
Protein of unknown function.
       0.675
SFK59286.1
Methyltransferase domain-containing protein.
 
     0.601
SFI91365.1
Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist.
  
     0.523
SFJ69157.1
Protein of unknown function.
   
    0.523
SFJ91734.1
galactofuranosylgalactofuranosylrhamnosyl-N- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase.
  
     0.481
SFJ91532.1
galactofuranosylgalactofuranosylrhamnosyl-N- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase.
  
     0.474
SFK59322.1
Glyoxalase family protein.
       0.441
SFK62719.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.432
SFI68787.1
Large subunit ribosomal protein L36.
  
    0.430
SFI87372.1
Hypothetical protein.
   
    0.412
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.