STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK59592.1Pimeloyl-ACP methyl ester carboxylesterase. (303 aa)    
Predicted Functional Partners:
SFJ44721.1
Mycocerosic acid synthase/phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C.
  
 0.846
SFK59569.1
AraC-type DNA-binding protein.
       0.559
SFJ11963.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.459
SFI88667.1
DNA-binding transcriptional regulator YbjK.
 
     0.451
SFK93117.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
  
  
  0.423
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.413
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.