STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK74414.1Tetratricopeptide repeat-containing protein. (791 aa)    
Predicted Functional Partners:
SFK74391.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
   
   0.584
SFK32846.1
Hypothetical protein.
  
     0.486
SFJ82577.1
Excreted virulence factor EspC, type VII ESX diderm.
  
     0.481
SFK74437.1
Branched-chain amino acid transport system substrate-binding protein.
       0.468
SFK74464.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.424
SFK74485.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.424
SFK74511.1
Branched-chain amino acid transport system ATP-binding protein.
       0.424
SFK74537.1
Branched-chain amino acid transport system ATP-binding protein.
       0.424
SFJ96053.1
Hypothetical protein.
  
 
   0.423
SFJ68059.1
Flavoprotein.
  
    0.412
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.