Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK80861.1 | SFK80886.1 | SAMN05421835_13518 | SAMN05421835_13519 | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | Trypsin. | 0.701 |
SFK80861.1 | SFK80910.1 | SAMN05421835_13518 | SAMN05421835_13520 | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | Type VII secretion protein EccE. | 0.495 |
SFK80886.1 | SFK80861.1 | SAMN05421835_13519 | SAMN05421835_13518 | Trypsin. | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | 0.701 |
SFK80886.1 | SFK80910.1 | SAMN05421835_13519 | SAMN05421835_13520 | Trypsin. | Type VII secretion protein EccE. | 0.541 |
SFK80910.1 | SFK80861.1 | SAMN05421835_13520 | SAMN05421835_13518 | Type VII secretion protein EccE. | 5-amino-6-(5-phosphoribosylamino)uracil reductase. | 0.495 |
SFK80910.1 | SFK80886.1 | SAMN05421835_13520 | SAMN05421835_13519 | Type VII secretion protein EccE. | Trypsin. | 0.541 |
SFK80910.1 | SFK80934.1 | SAMN05421835_13520 | SAMN05421835_13521 | Type VII secretion protein EccE. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.536 |
SFK80910.1 | SFK80954.1 | SAMN05421835_13520 | SAMN05421835_13522 | Type VII secretion protein EccE. | Conserved hypothetical protein. | 0.488 |
SFK80934.1 | SFK80910.1 | SAMN05421835_13521 | SAMN05421835_13520 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Type VII secretion protein EccE. | 0.536 |
SFK80934.1 | SFK80954.1 | SAMN05421835_13521 | SAMN05421835_13522 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Conserved hypothetical protein. | 0.697 |
SFK80954.1 | SFK80910.1 | SAMN05421835_13522 | SAMN05421835_13520 | Conserved hypothetical protein. | Type VII secretion protein EccE. | 0.488 |
SFK80954.1 | SFK80934.1 | SAMN05421835_13522 | SAMN05421835_13521 | Conserved hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.697 |