STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK86602.1DNA-binding transcriptional regulator, AcrR family. (188 aa)    
Predicted Functional Partners:
SFK09212.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.615
SFK86623.1
Conserved hypothetical protein, steroid delta-isomerase-related.
 
     0.605
SFK38276.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.593
SFK86641.1
Protein of unknown function.
       0.542
SFJ65756.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.539
SFK86664.1
Hypothetical protein.
       0.539
SFK86688.1
Hypothetical protein.
       0.539
SFI56098.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.498
SFK81726.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.429
Your Current Organism:
Amycolatopsis sacchari
NCBI taxonomy Id: 115433
Other names: A. sacchari, Amycolatopsis sacchari Goodfellow et al. 2001, CIP 107029, DSM 44468, JCM 11272, KCTC 9863, NBRC 100339
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.