STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA47892.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
AKA47894.1
N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
AKA47891.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.988
AKA49471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.968
AKA47890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
AKA47893.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
AKA48127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.648
AKA48079.1
Phosphoribosylaminoimidazole synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.516
AKA48108.1
Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.516
AKA48954.1
Molecular chaperone DnaJ; Chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.485
AKA47889.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.450
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.