STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA48287.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)    
Predicted Functional Partners:
rps19p
Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.967
AKA47749.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.959
rps10p
30S ribosomal protein S10; Involved in binding tRNA to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.947
AKA49378.1
30S ribosomal protein S24; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.944
rps28e
30S ribosomal protein S28; The function of S28E in the ribosome is unknown but the structure shows a variants OB-fold that is found in nucleic acid-binding proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.944
AKA48440.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.943
AKA47857.1
30S ribosomal protein S6; The function of this ribosomal subunit is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.942
AKA47794.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.939
AKA48583.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.938
AKA47750.1
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.937
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.