STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA48303.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)    
Predicted Functional Partners:
AKA48248.1
7-cyano-7-deazaguanine tRNA-ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
AKA49358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.737
AKA48106.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.691
AKA49537.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.691
AKA48304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.625
AKA49530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.611
AKA49569.1
Single-stranded DNA exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.539
AKA48811.1
Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.473
AKA48656.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.470
AKA48146.1
2-methylthioadenine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.463
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.