STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA48822.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
AKA48225.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.745
AKA49469.1
Ribonuclease Z; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.679
AKA48472.1
Exonuclease; Involved in the 3' to 5' degradation of a variety of RNA species; forms a trimer of heterodimers (hexamer) with Rrp42; Rrp41 is the catalytically active subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.648
AKA49407.1
Translation initiation factor IF-2; Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis; also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.570
AKA49326.1
ATP--cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.453
AKA48450.1
Cobalamin biosynthesis protein CobD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.443
AKA49373.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.436
AKA49470.1
Lhr helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.436
AKA48444.1
Translation initiation factor 6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.434
AKA47758.1
Translation initiation factor 1A; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.432
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.