STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA48836.1CRISPR-associated protein Cas1; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)    
Predicted Functional Partners:
AKA48835.1
CRISPR-associated protein Cas2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
AKA48837.1
CRISPR-associated protein Cas4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.984
AKA48841.1
CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.889
AKA48838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.841
AKA48840.1
CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.809
AKA48839.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
AKA47862.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.594
AKA48842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
AKA48761.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.401
AKA49340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.401
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.