STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA48918.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)    
Predicted Functional Partners:
AKA48395.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.837
AKA48497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.837
AKA49088.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.837
AKA49345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.837
AKA49509.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.837
AKA49585.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.837
AKA48968.1
isoleucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.768
AKA48212.1
DNA repair and recombination protein RadA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.749
AKA47745.1
Mov34/MPN/PAD-1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.744
AKA48964.1
DNA repair protein RadB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.740
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.