STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKA49470.1Lhr helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (904 aa)    
Predicted Functional Partners:
AKA47779.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.557
AKA48668.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
AKA48098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.554
AKA48156.1
Ribosomal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.550
AKA48172.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.542
AKA49096.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.533
AKA48099.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.532
AKA48964.1
DNA repair protein RadB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.520
AKA48022.1
Iron-dependent repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.512
AKA47807.1
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.508
Your Current Organism:
uncultured archaeon
NCBI taxonomy Id: 115547
Other names: u. archaeon, uncultured Archaea archaeon, uncultured archaeoote
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.