STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373625_00340Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_000373625_00341
Unannotated protein.
 
     0.868
GCA_000373625_00339
Unannotated protein.
       0.678
GCA_000373625_03057
Unannotated protein.
 
    0.661
GCA_000373625_01168
Unannotated protein.
 
     0.642
GCA_000373625_03414
Unannotated protein.
  
 
 0.633
GCA_000373625_02641
Unannotated protein.
 
    0.624
GCA_000373625_00343
Unannotated protein.
       0.570
GCA_000373625_00344
Unannotated protein.
       0.570
GCA_000373625_00533
Unannotated protein.
  
  
 0.559
GCA_000373625_00532
Unannotated protein.
      
 0.420
Your Current Organism:
Streptomyces sp. LaPpAH108
NCBI taxonomy Id: 1155714
Other names: S. sp. LaPpAH-108, Streptomyces sp. LaPpAH-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.