STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000373625_02076Unannotated protein. (84 aa)    
Predicted Functional Partners:
GCA_000373625_02075
Unannotated protein.
 
     0.953
GCA_000373625_02642
Unannotated protein.
 
     0.895
GCA_000373625_06068
Unannotated protein.
 
     0.803
GCA_000373625_03284
Unannotated protein.
 
     0.788
GCA_000373625_02480
Unannotated protein.
 
     0.785
GCA_000373625_06070
Unannotated protein.
 
     0.785
GCA_000373625_05247
Unannotated protein.
 
     0.784
GCA_000373625_04665
Unannotated protein.
 
     0.776
GCA_000373625_03322
Unannotated protein.
  
     0.774
GCA_000373625_04390
Unannotated protein.
  
     0.774
Your Current Organism:
Streptomyces sp. LaPpAH108
NCBI taxonomy Id: 1155714
Other names: S. sp. LaPpAH-108, Streptomyces sp. LaPpAH-108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.